CDS

Accession Number TCMCG042C39649
gbkey CDS
Protein Id XP_016471785.1
Location complement(join(7391..7706,8284..8541,8762..8943,9737..10332,10493..10646,12264..12426,12530..12643,12794..12857,12939..13245,13616..13762,13854..14015))
Gene LOC107793854
GeneID 107793854
Organism Nicotiana tabacum

Protein

Length 820aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016616299.1
Definition PREDICTED: U3 small nucleolar RNA-associated protein 4 homolog [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category S
Description WD40 repeats
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14548        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010051        [VIEW IN EMBL-EBI]
GO:0010073        [VIEW IN EMBL-EBI]
GO:0010101        [VIEW IN EMBL-EBI]
GO:0010102        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010305        [VIEW IN EMBL-EBI]
GO:0010311        [VIEW IN EMBL-EBI]
GO:0010449        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0035266        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048507        [VIEW IN EMBL-EBI]
GO:0048527        [VIEW IN EMBL-EBI]
GO:0048528        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0090696        [VIEW IN EMBL-EBI]
GO:0090697        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1905393        [VIEW IN EMBL-EBI]
GO:2000012        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTCTCAGTATATAGGAGCAGCTCAGTTGAGTGGAAGCCATCACCGGTGGTAGCTTTAGCTACCAGCGCCGACGATTCTCAAGTTGCTGCCGCTCGTGAAGACGGCTCTCTTGAGATTTGGCTCGTTTCTCCTGGCTCTGTCGGCTGGCACTGTCAGCTCACAATACACGGGAATCCAAATTCTAGGGTTTCTTCGCTGGTTTGGTGTAGGTCCGGTTCGAGTGGTGGTTCGGCTGCTGGTCGGTTGTTTTCCGCCAGCATTGATGGATCAGTCTCTGAATGGGACCTTTTTGATTTGAGACAGAAGATTGCGCTAGATTCTATTGGTGTTTCAATATGGCAGATGGCTGTGGAACCATGCAATAATCCACAGCTTAATCAAAAGCAGTCTCCCAAGCTTTATGAGAATGGCCACGCCAATCACAGCAATAACGAGAGCAGTGATGGCGAGAGCAGTGAAAGCGAAGATGGTGATGAGTCCATAGAGCTTCACGAGGATCATGCTAGTGATAATAGCCGAATAGCATTTGCTTGTGATGATGGATGTGTAAGAATCTACTGTGTCGATGATGACGAAAACTTAACTTACAAAAGATCATTGCCAAGGGTCAGTGGACGTGCATTGAGTGTCACTTGGAGTTCTGATGCAAGTAGGATATTTTCTGGGAGTAGTGATGGGTTTATAAGATGCTGGGATGCCAAGTTTGCTCATGAAATATACAGGATATCAGTTGGTCTTGGAGGTCTGGGTAGTGGATCTGAACTATGCATATGGTCGTTACTTGCATTGAGATGTGGTACCCTGGTGAGTGCTGATAGTTCTGGGAGTGTTCAGTTCTGGGACACCAAGCATGGGACTCTTGTGAATGCCATTTCCAATCATAAAGGTGATGTTACTGCTTTAGCAGCATCTCCCAGCCATAGAAGGGTGTTTTCTGCTGGCTCCGATGGTCAGGTCATACTTTATAAGCTCTCTATGGATTTTGTCGGGGCTAATGATGGAAATATAACCTCTGGAGTCCTCAAGAAATGGGTTTATGTTAGTCATGTGAGGGCCCATACACATGATGTGAGGGCCTTGACTGTTGCTGTGCCCATCAGTGCTGAAGATGCCATAGTTGAACGGGACGAAAAGAGACCTCGATCTAGGTCGAACCCCCTTGAGTCTAGTTACCATAAATGGGCACATTTAGGCGTGCCAATGCTTATCTCTGGCGGTGATGATACTAAACTTTTTGCATACTCTGCGAGGGAGTTTACCAAGTTTTCCCCACATGACATTTGTCCTGCACCGCAGAGGCCGCATATACAACTTGCAATAAATACGATTTTCAATCACTCTTCGTTACTCTTAATCCAAGCGTCATACTGGATTGATATTTTGTGTGTTCGTGAAATAAATGGAGCTGTGTCCAACAGCTGTGGTCCATCTGCTGGGGCTGCCAAGACAGATCTGGTCGCCCGAGTTAAGTGTAAAGCTTCAAGGAAAATTACATGCAGTGCAATTTCGCCTTCTGGTGCCTTTTTTGCTTATTCTGATCATGTAAAACCCAGCCTTCTTGAGCTTAAGAGAAGTGCTGCCAGCAAGAGTCCATGGGCAGTCAACAAAAGGCATCTCCCTTTGGAACTGCCATTTGCCCATTCAATGGTTTTCAGCGCTGATTCTTCTCGGCTGATGATAGCGGGGTGTGACAGAAGGGTCTACGTGGTGGATGTAGGAAGCTCAGAGATAATTTATGTTTTTACACCTCGTCATAAAGAATACGCTGAAGAACTGTCCCCGACTGAACCTCCCATAACTAGACTGTTCACCAGCACTGATGGGCAATGGCTAGCTGCTATCAACTGCTTTGGAGATGTGTATATATTTAATCTAGAGATACAGAGGCAACACTGGTTTATATCAAGATTGGATGGTCATTCAGTTATGGCAGGTGGTTTTACTCCTCAAAATAGCAATGTGCTTATAGTATCCACTTCGTCCAACCAGGTATATGCCTTAGATGTTGAAGCTAAACAGTTGGGAGAATGGTCAAATCGTAATACATTTTCCCTGCCGAGGAGATATCAAGAATTTCCTGGAGAAGTGATTGGGCTTTCATTCCCACCTTCCAATTCTTCATCTGTCATCGTCTATAGTCCAAGGGCAATGTGTTTGATCGACTTTGGGAAGCCAGTAGGCGGCGATGATGAGGCTGACTTGGCCAATGGTCAAGATATATCATTGAAGAAGCTACATAGTAGTCTTGGGAATGGAAGTTTGAAGCGTAAGTCAGAGGTCAGTGAGTTGGAGACTAAACTTAGTGGTAAAAAGAATTTTGAGTTTCATCCTTTCAGAGATCCTGTATTATTTGTTGGACATCTTTCAAAAACCTCTACCTTGATCATGGACAAACCTTGGATTCAAGTGGTTAAAAGTTTTGATGCTACACCTGTTCACAGACATATTTTTGGGACATAA
Protein:  
MLSVYRSSSVEWKPSPVVALATSADDSQVAAAREDGSLEIWLVSPGSVGWHCQLTIHGNPNSRVSSLVWCRSGSSGGSAAGRLFSASIDGSVSEWDLFDLRQKIALDSIGVSIWQMAVEPCNNPQLNQKQSPKLYENGHANHSNNESSDGESSESEDGDESIELHEDHASDNSRIAFACDDGCVRIYCVDDDENLTYKRSLPRVSGRALSVTWSSDASRIFSGSSDGFIRCWDAKFAHEIYRISVGLGGLGSGSELCIWSLLALRCGTLVSADSSGSVQFWDTKHGTLVNAISNHKGDVTALAASPSHRRVFSAGSDGQVILYKLSMDFVGANDGNITSGVLKKWVYVSHVRAHTHDVRALTVAVPISAEDAIVERDEKRPRSRSNPLESSYHKWAHLGVPMLISGGDDTKLFAYSAREFTKFSPHDICPAPQRPHIQLAINTIFNHSSLLLIQASYWIDILCVREINGAVSNSCGPSAGAAKTDLVARVKCKASRKITCSAISPSGAFFAYSDHVKPSLLELKRSAASKSPWAVNKRHLPLELPFAHSMVFSADSSRLMIAGCDRRVYVVDVGSSEIIYVFTPRHKEYAEELSPTEPPITRLFTSTDGQWLAAINCFGDVYIFNLEIQRQHWFISRLDGHSVMAGGFTPQNSNVLIVSTSSNQVYALDVEAKQLGEWSNRNTFSLPRRYQEFPGEVIGLSFPPSNSSSVIVYSPRAMCLIDFGKPVGGDDEADLANGQDISLKKLHSSLGNGSLKRKSEVSELETKLSGKKNFEFHPFRDPVLFVGHLSKTSTLIMDKPWIQVVKSFDATPVHRHIFGT